Incorrect motion baking from Anim Sequence to Modular Control Rig

When using a modular control rig and baking to a control rig directly from an anim sequence, some parts do not bake correctly.

Steps to Reproduce

• Build a standard modular control rig on SKM_Manny
• Open an anim sequence with root motion.
• Click on edit in sequencer.
• Choose bake to control rig and choose your new modular rig.